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Omics-based Research: Creating a Four-Chambered Heart in a Dish with Dr. Guang Li

Released: 3/7/2023

In this episode of That’s Pediatrics, our hosts talk with Guang Li, PhD, researcher at UPMC Children’s Hospital of Pittsburgh and assistant professor in the Department of Developmental Biology at the University of Pittsburgh School of Medicine.

In this episode our experts discuss:

  • Dr. Li’s experience and path to research at UPMC Children’s Hospital (1:56)
  • The two models to study the developing heart (3:10)
  • The prevalence of congenital heart defects and the impact of Dr. Li’s research on preventing heart defects in the future (4:59)
  • The gaps in knowledge of heart development and how his lab is working to address those gaps (6:29)
  • Single cell Omics technology – what it entails and how Dr. Li uses it in his lab (7:29)
  • The future clinical implications of Dr. Li’s research (9:51)
  • The importance of translating knowledge from mouse models to humans via Organoids and growth factors (11:18)
  • Two approaches to creating an in vivo four-chambered heart (12:28)
  • How some growth factors are used to control the size of the developing heart (15:01)
  • The future of this research and what the big goals and applications are (15:55)

Meet Our Guest

Guang Li, PhDGuang Li, PhD, received his doctorate from the Chinese Academy of Sciences in Shanghai by studying the epigenetic regulations in plant organ development. After that, he joined the Stanford Cardiovascular Institute as a postdoc to study heart development in mouse and human iPSC systems. In 2019, Dr. Li came to UPMC Children's Hospital to start his own lab where he continues to use high throughput technologies to answer questions about heart development as it's a critical embryonic developmental process. Combining single-cell mRNA sequencing, single molecular in situ hybridization, machine learning, and advanced imaging techniques, Dr. Li’s current lab systematically analyzes the temporal and spatial development of the heart at the single-cell level. Meanwhile, with the knowledge gained from the study of basic cardiac lineage regulations, the lab is also exploring the lineage defects in congenital heart diseases using patient-derived iPSCs.

Meet Our Hosts

Amanda Poholek, PhDAmanda Poholek, PhD, is director of the Health Science Sequencing Core Facility at UPMC Children’s Hospital of Pittsburgh and an assistant professor of Pediatrics and Immunology at the University of Pittsburgh School of Medicine. She earned her bachelor’s degree from Fordham University and her doctorate degree in cell biology from Yale University. She also completed a post-doctoral fellowship at the National Institute of Arthritis and Musculoskeletal and Skin Diseases at the National Institutes of Health. Dr. Poholek’s lab at UPMC Children’s studies immune cells and how transcriptomics and epigenetics contribute to health and disease.

Arvind Srinath, MD, MSArvind Srinath, MD, MS, is the Pediatric Gastroenterology Fellowship program director at UPMC Children’s Hospital of Pittsburgh and an associate professor of Pediatrics at the University of Pittsburgh School of Medicine. He received his bachelor’s degree from Johns Hopkins University and his medical degree from the University of Pittsburgh School of Medicine before completing a residency at Johns Hopkins Hospital, a fellowship at UPMC Children’s Hospital of Pittsburgh, and a master’s degree in medical education at the University of Pittsburgh School of Medicine. Dr. Srinath’s areas of interest are curricular development, functional gastrointestinal disorders, and telehealth. Find him on Twitter: @Srinath_Arvind.

Disclaimer

This podcast is for informational and educational purposes only. It is not medical care or advice. Clinicians should rely on their own medical judgements when advising their patients. Patients in need of medical care should consult their personal care provider.